. . "Test Biochementities Class" . . "Just for testing." . . . "Test" . "Test class in a test ontology" . . . "Morphological Feature Observation" . "A specific observation of a morphological feature in an image, linking the feature instance to its spatial location (image region with coordinates) and the taxon or organism being observed." . . . "Morphological Feature" . "A morphological feature of an organism or taxon." . . . "A computational method, tool, or algorithm that produces predictions or scores from biological sequence or structure data. Referenced by observation FDOs of Types 3–6 via `mac:hasPredictionMethod`. Instances carry one or more `cito:citesAsAuthority` URIs identifying the published descriptions of the method." . "Computational Method" . . . . "An abstract parent class for computational predictions about a Spike RBD variant, produced by a named computational method. Concrete subclasses cover specific predicted quantities (`mac:ComputationalPredictionRMSD`, `…SASA`, `…PLDDT`, `…AgMata`). Anticipates additional computational prediction types as siblings without restructuring the hierarchy. This class is abstract: all instances belong to one of its concrete subclasses." . "Computational Prediction" . . . . "A computed prediction of the aggregation propensity of a Spike RBD variant, produced by the Bio2Byte AgMata method. The score is sequence-derived and is therefore predicted once per variant rather than once per structural-prediction method." . "Computational Prediction AgMata" . . . . "A computed prediction confidence score (predicted Local Distance Difference Test) for the structural prediction of a Spike RBD variant, produced by a named computational structure-prediction method." . "Computational Prediction pLDDT" . . . . "A computed prediction of the Root Mean Square Deviation between a predicted structure of a Spike RBD variant and a reference structure, produced by a named computational structure-prediction method." . "Computational Prediction RMSD" . . . . "A computed prediction of the Solvent Accessible Surface Area of a Spike RBD variant's predicted structure, produced by a named computational structure-prediction method." . "Computational Prediction SASA" . . . . "An experimental observation of binding affinity and expression level measurements for a Spike RBD variant, determined by deep mutational scanning (Bloom Lab protocol). One FDO records all six DMS metrics (`bind`, `delta_bind`, `expr`, `delta_expr`, `confidence_bind`, `confidence_expr`) for a single variant." . "Experimental DMS Observation" . . . . "An experimental assay or measurement protocol that produces empirical observations about biological entities. Referenced by Type 7 observation FDOs via `mac:hasExperimentalMethod`. Instances carry one or more `cito:citesAsAuthority` URIs identifying the published descriptions of the assay." . "Experimental Method" . . . . "An abstract parent class for empirical observations produced by laboratory assays on a Spike RBD variant. Currently has one concrete child (`mac:ExperimentalDMSObservation`, deep mutational scanning); the forthcoming Bosch extension adds `mac:ExperimentalCellSortingObservation` as a sibling. This class is abstract: all instances belong to one of its concrete subclasses." . "Experimental Observation" . . . . "An abstract parent class for methods, tools, assays, or surveillance platforms that produce observations within the MAC FAIR Digital Twin substrate. Concrete subclasses distinguish computational methods (`mac:ComputationalMethod`), experimental methods (`mac:ExperimentalMethod`), and observational/surveillance methods (`mac:ObservationalMethod`). Instances of any concrete subclass carry one or more `cito:citesAsAuthority` URIs identifying the published descriptions of the method. This class is abstract: all instances belong to one of its concrete subclasses." . "Method" . . . "An abstract parent class for all observation-layer FDOs in a MAC FAIR Digital Twin. Concrete subclasses include `mac:RealWorldOccurrence` (Type 2), `mac:ComputationalPrediction` and its sub-hierarchy (Types 3–6), `mac:ExperimentalObservation` and its sub-hierarchy (Type 7), and `mac:WHOVariantClassification` (Type 8). Every member links to the FDT's anchor (a `mac:SpikeRBDVariant`) via `mac:isObservationOf`. This class is abstract: it carries no direct instances; all instances belong to one of its concrete subclasses." . "Observation" . . . "An epidemiological surveillance system or data-collection platform through which real-world occurrences of biological entities are documented. Referenced by Type 2 observation FDOs via `mac:hasSurveillanceMethod`. Instances carry one or more `cito:citesAsAuthority` URIs identifying the published descriptions of the surveillance platform." . "Observational Method" . . . . "A documented detection of a SARS-CoV-2 Spike variant in the real world, as reported in a surveillance database (typically GISAID). The occurrence is anchored to a specific collection date and to a GeoNames-identified location." . "Real-World Occurrence" . . . . "A variant of the SARS-CoV-2 Spike receptor-binding domain (RBD, 195 residues) produced by one or more amino-acid substitutions from the wild-type Wuhan isolate (UniProt P0DTC2). This class is the type of the anchor FDO (A_r) of a FAIR Digital Twin; all observation FDOs link to it via `mac:isObservationOf` and collectively constitute the FDT." . "Spike RBD Variant" . . . "A SARS-CoV-2 variant designated by the WHO as carrying evidence of increased transmissibility, increased disease severity, or significant reduction in vaccine or therapeutic effectiveness." . "Variant of Concern" . . . . "A SARS-CoV-2 variant designated by the WHO as carrying genetic markers associated with phenotypic changes and demonstrated epidemiological impact warranting enhanced monitoring." . "Variant of Interest" . . . . "A SARS-CoV-2 variant for which the WHO has identified evidence of growth advantage or immune escape and that is being monitored precautionarily pending further characterisation." . "Variant Under Monitoring" . . . . "An abstract parent class for the World Health Organization's controlled-vocabulary risk designations applied to SARS-CoV-2 variants: Variant of Concern (`mac:VOC`), Variant of Interest (`mac:VOI`), and Variant Under Monitoring (`mac:VUM`). Used as the range of `mac:hasWHOClassification`. This class is abstract: all instances belong to one of its concrete subclasses." . "WHO Designation" . . . "A classification of a SARS-CoV-2 lineage according to the WHO risk framework (VOC / VOI / VUM), with a specified assignment date and reference URL. Time-stamped because designation status changes over time." . "WHO Variant Classification" . . . . "Breeding time" . "This class is used to group together different reproduction rhythms of Carabidae" . . . . "Testimonial" . "A testimonial somebody is giving for a particular organization, product, or other entity." . . . "Morphological Character" . "A morphological character is a specific, observable physical trait or structural feature of an organism, such as shape, size, color, or internal anatomy, used in biological studies to identify, classify, or compare species." . . . . "Poster presentation" . . "The presentation of a poster, as a talk and/or at a poster stand." . . . "Individual agent" . . "An agent that is an individual, human or artificial, and not a group of individuals." . . . "Space" . . "Spaces are any kind of collaborative and social units, such as groups, events, or projects." . . . "Chorotype" . "This term is used to group together similar biogeographical ranges." . . . "Confidence level" . "Levels of how confident one is about the results of a study." . . . "Validation status" . "The status of validation of a concluded replication study." . . . "FORRT Replication Outcome" . "The outcome of a replication study according to the FORRT framework." . . . "Semantic Interoperability Profile" . . "A Semantic Interoperability Profil (SIP) is a list of FAIR Supporting Resources chosen by a community to support semantic interoperability of (meta)data." . . . "Reproduction/Replication Study" . . "A study that is both, a reproduction as well as replication study." . . . . . "Reproduction Study" . . "A study that reproduces another study with same methodology and same tools (direct reproduction)." . . . "Replication Study" . . "A study that replicates another study with different methodology or conditions." . . . "Morphological Feature" . . "A morphological feature of an organism or taxon." . . . "Biological Feature" . "A feature of a biological organism or taxon." . . . "Uncertainty Model" . "Documentation of the model used to compute or estimate uncertainty." . . . "FORRT Replication Study" . "A replication study according to the FORRT framework." . . . "Taskunit" . . "A time-limited collaborative unit with focus on structuring into sub-units." . . . "AI as personalized learning tool" . . "Approach to use AI in education as a personalized learning tool." . . . "AI in Education Approach" . "An approach to apply AI in an education setting." . . . "GenAI Agent" . . "An artificial agent applying GenAI." . . . "GenAI Model" . "A specific model of a GenAI system." . . . "Scalability Claim" . . "A claim according to the FORRT framework about how performance changes with scale." . . . "Computational Performance Claim" . . "A claim according to the FORRT framework about algorithm/method speed, runtime, and efficiency metrics." . . . "Computational and Performance FORRT Claim" . . "A claim according to the FORRT framework in the category of Computational and Performance." . . . "FORRT Claim" . "A claim according to the FORRT framework." . . . "PCC Context" . "The context aspect of a review question according to the PCC framework." . . . "PCC Concept" . "The concept aspect of a review question according to the PCC framework." . . . "PCC Population" . "The population aspect of a review question according to the PCC framework." . . . "PCC Review Question" . "A review question according to the PCC (Population, Concept, Context) framework." . . . "Solution Path" . "A solution path in the context of FAIR requirements." . . . "Purpose" . "A purpose in the context of FAIR requirements." . . . "Action" . "An action in the context of FAIR requirements." . . . "Role" . "A role in the context of FAIR requirements." . . . "Digital Object Analysis" . "A digital object analysis in the context of FAIR requirement." . . . "User Story" . "A user story in the context of FAIR requirements." . . . "Case Study" . "A case study in the context of FAIR requirements." . . "GenAI+KG application" . . "A software application that involves generative AI and knowledge graphs." . . . "Thanks" . "An expression of gratitude." . . . "Event" . . "A time-limited kind of collaborative unit with focus on exchange." . . . "Campaign" . . "A time-limited kind of collaborative unit with focus on outreach." . . . "Initiative" . . "A time-limited kind of collaborative unit with focus on coordination." . . . "Project" . . "A time-limited kind of collaborative unit with focus on getting work done." . . . "Taskforce" . . "A time-limited kind of collaborative unit with focus of serving as formal vessel" . . . "Consortium" . . "A time-limited kind of collaborative unit with focus on bringing units together." . . . "Community" . . "An open-ended kind of collaborative unit with focus on exchange." . . . "Outlet" . . "An open-ended kind of collaborative unit focussed on outreach." . . . "Program" . . "An open-ended kind of collaborative unit with focus on coordination." . . . "Group" . . "An open-ended kind of collaborative unit with focus on getting work done." . . . "Division" . . "An open-ended kind of collaborative unit with focus on structuring into sub-units." . . . "Alliance" . . "An open-ended kind of collaborative unit with the focus on bringing units together." . . . "Organization" . . "An open-ended kind of collaborative unit with the focus of serving as a formal vessel." . . "Test" . "testing..." . . . . . . . . . . . . "FAIR Principle"@en . . . "A FAIR principle describes an essential aspect of FAIR."@en . . . . "FAIR Principle or Sub-Principle"@en . "Either a FAIR principle or one of its sub-principles."@en . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . "FAIR SubPrinciple"@en . . . "A sub-principle of a FAIR principle."@en . . . . . . . "FAIR principles"@en . . . . . . "Part-level View Display" . . "A part-level view display shows the view on the level of the parts of a resource." . . . . "Top-level View Display" . . "A top-level view display shows the view on the top-level of the resource, as compared to the level of its parts." . . . "Resource View" . . "A general view, based on a query template, that can be applied to different resources." . . . "View Display" . . "A view display links a view to a resource for which the given view should be shown." . . . "View Entity" . "A View Entity is either a general Resource View (not applied to any specific resource) or a specific View Display (applied to specific resources)." . . . "Ontology Version" . . "A specific version of an OWL ontology." . . . "Science Live Credit" . "The issuing of a credit in the context of the Science Live system." . . . "Systematic Review Search Strategy" . "The strategies for searching applied to a given systematic review." . . . "Deactivated View Display" . . "A view display that is deactivated, meaning that it is not shown on the page." . . . "Activated View Display" . . "A view display that is activated, which means that it is shown on the page" . . . "View Entry Action" . . "A View Entry Action is a kind of View Action that applies to a specific entry of a view's results, as compared to an action that applies to the entire result." . . . "View Result Action" . . "A View Result Action is a kind of View Action that applies to the whole result (e.g. table), as compared to an action that applies to a specific entry of a result." . . . "View Action" . "This class represents an action for a resource view. Such actions are typically shown as buttons/links to the user." . . . "Data Collection" . "A folder containing files of type datasets." . . . "Sample Description" . "A document that provides context and methodological information about the samples." . . . "Cohort Description" . "A document that provides context and methodological information about the cohort such as number of samples." . . . "File Naming Information" . "A document that provides an explanation of the naming convention used for dataset files." . . . "Authentication and authorization service"@en . . . "A service that mediates access to digital objects according to specifed conditions."@en . . . "Available FAIR Supporting Resource"@en . . "A FAIR Supporting Resource that is available for use."@en .