@prefix ns1: <http://purl.org/np/> .
@prefix this: <http://purl.org/np/RAFZVCvFTwhuGWf7nzovfrWipaPUZbqeYw99XtL5q6KL8> .
@prefix sub: <http://purl.org/np/RAFZVCvFTwhuGWf7nzovfrWipaPUZbqeYw99XtL5q6KL8#> .
@prefix np: <http://www.nanopub.org/nschema#> .
@prefix dct: <http://purl.org/dc/terms/> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix nt: <https://w3id.org/np/o/ntemplate/> .
@prefix npx: <http://purl.org/nanopub/x/> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix orcid: <https://orcid.org/> .
@prefix prov: <http://www.w3.org/ns/prov#> .

ns1:RAFZVCvFTwhuGWf7nzovfrWipaPUZbqeYw99XtL5q6KL8 a np:Nanopublication;
  np:hasAssertion sub:assertion;
  np:hasProvenance sub:provenance;
  np:hasPublicationInfo sub:pubinfo;
  dct:created "2023-08-15T09:15:27.877Z"^^xsd:dateTime;
  dct:creator orcid:0000-0002-1267-0234;
  dct:license <https://creativecommons.org/licenses/by/4.0/>;
  npx:supersedes ns1:RAUW1IwwqJTzu_JbKS_VfsZNF6WKMV09GslJ7VXV117mM;
  rdfs:label "Template: Expressing a synonymy association between two taxon names";
  nt:wasCreatedFromProvenanceTemplate ns1:RANwQa4ICWS5SOjw7gp99nBpXBasapwtZF1fIM3H2gYTM;
  nt:wasCreatedFromPubinfoTemplate ns1:RAA2MfqdBCzmz9yVWjKLXNbyfBNcwsMmOqcNUxkk1maIM,
    ns1:RAh1gm83JiG5M6kDxXhaYT1l49nCzyrckMvTzcPn-iv90, ns1:RAjpBMlw3owYhJUBo3DtsuDlXsNAJ8cnGeWAutDVjuAuI;
  nt:wasCreatedFromTemplate ns1:RANjqEfLnGSzLuq0heRSXN0psYWW0oX4v3W8w7osb3xfs .

<http://purl.obolibrary.org/obo/NOMEN_0000017> rdfs:label "synonym" .

<http://purl.obolibrary.org/obo/NOMEN_0000096> rdfs:label "ICNP synonym" .

<http://purl.obolibrary.org/obo/NOMEN_0000101> rdfs:label "ICNP homotypic synonym" .

<http://purl.obolibrary.org/obo/NOMEN_0000102> rdfs:label "ICNP heterotypic synonym" .

<http://purl.obolibrary.org/obo/NOMEN_0000276> rdfs:label "ICZN synonym" .

<http://purl.obolibrary.org/obo/NOMEN_0000277> rdfs:label "ICZN objective synonym" .

<http://purl.obolibrary.org/obo/NOMEN_0000285> rdfs:label "ICZN subjective synonym" .

<http://purl.obolibrary.org/obo/NOMEN_0000287> rdfs:label "ICZN synonymic homonym" .

<http://purl.obolibrary.org/obo/NOMEN_0000372> rdfs:label "ICN synonym" .

<http://purl.obolibrary.org/obo/NOMEN_0000392> rdfs:label "ICN heterotypic synonym" .

<http://purl.obolibrary.org/obo/NOMEN_0000393> rdfs:label "ICN homotypic synonym" .

sub:assertion a nt:AssertionTemplate;
  dct:description "<p>Such a nanopublication expresses a relation of synonymy between two organism taxons.</p>";
  rdfs:label "Expressing a synonymy association between two taxon names";
  nt:hasDefaultProvenance ns1:RA2VjRiJ5AsNnPHDXuOqvsEJwTwqtj5rBb-OFkpPOzd9s;
  nt:hasNanopubLabelPattern "${subjtaxonname} - ${relation} - ${objtaxonname}";
  nt:hasStatement sub:st00, sub:st05, sub:st10, sub:st11, sub:st12, sub:st40, sub:st41,
    sub:st42, sub:st60;
  nt:hasTag "Biodiversity";
  nt:hasTargetNanopubType <http://purl.obolibrary.org/obo/NOMEN_0000017>;
  prov:wasAttributedTo orcid:0000-0002-1267-0234 .

sub:association a nt:IntroducedResource, nt:LocalResource;
  rdfs:label "this association" .

sub:comment a nt:LongLiteralPlaceholder;
  rdfs:label "short explanation related to the above statement" .

sub:objtaxon a nt:LocalResource;
  rdfs:label "the object taxon concept" .

sub:objtaxondef a nt:ExternalUriPlaceholder;
  rdfs:label "publication DOI (https://doi.org/...) or taxon treatment ID (https://treatment.plazi.org/id/...)";
  nt:hasRegex "(https://doi.org/|https://treatment.plazi.org/id/).+" .

sub:objtaxonname a nt:GuidedChoicePlaceholder;
  rdfs:label "search and select from list (if not found, you may paste URL from IPNI, MycoBank, Index Fungorum, or ZooBank)";
  nt:possibleValuesFromApi "https://vodex.petapico.org/nidx/query?rows=100&q=label:" .

sub:relation a nt:RestrictedChoicePlaceholder;
  rdfs:label "the type of synonymy relation between the two taxa";
  nt:hasDefaultValue <http://purl.obolibrary.org/obo/NOMEN_0000017>;
  nt:possibleValue <http://purl.obolibrary.org/obo/NOMEN_0000017>, <http://purl.obolibrary.org/obo/NOMEN_0000096>,
    <http://purl.obolibrary.org/obo/NOMEN_0000101>, <http://purl.obolibrary.org/obo/NOMEN_0000102>,
    <http://purl.obolibrary.org/obo/NOMEN_0000276>, <http://purl.obolibrary.org/obo/NOMEN_0000277>,
    <http://purl.obolibrary.org/obo/NOMEN_0000285>, <http://purl.obolibrary.org/obo/NOMEN_0000287>,
    <http://purl.obolibrary.org/obo/NOMEN_0000372>, <http://purl.obolibrary.org/obo/NOMEN_0000392>,
    <http://purl.obolibrary.org/obo/NOMEN_0000393> .

sub:st00 rdf:object <https://w3id.org/biolink/vocab/OrganismTaxonToOrganismTaxonAssociation>;
  rdf:predicate rdf:type;
  rdf:subject sub:association .

sub:st05 rdf:object sub:relation;
  rdf:predicate <https://w3id.org/biolink/vocab/predicate>;
  rdf:subject sub:association .

sub:st10 rdf:object sub:subjtaxon;
  rdf:predicate <https://w3id.org/biolink/vocab/subject>;
  rdf:subject sub:association .

sub:st11 rdf:object sub:subjtaxonname;
  rdf:predicate <https://w3id.org/kpxl/biodiv/terms/hasTaxonName>;
  rdf:subject sub:subjtaxon .

sub:st12 a nt:OptionalStatement;
  rdf:object sub:subjtaxondef;
  rdf:predicate <https://w3id.org/kpxl/biodiv/terms/hasTaxonConceptDefinition>;
  rdf:subject sub:subjtaxon .

sub:st40 rdf:object sub:objtaxon;
  rdf:predicate <https://w3id.org/biolink/vocab/object>;
  rdf:subject sub:association .

sub:st41 rdf:object sub:objtaxonname;
  rdf:predicate <https://w3id.org/kpxl/biodiv/terms/hasTaxonName>;
  rdf:subject sub:objtaxon .

sub:st42 a nt:OptionalStatement;
  rdf:object sub:objtaxondef;
  rdf:predicate <https://w3id.org/kpxl/biodiv/terms/hasTaxonConceptDefinition>;
  rdf:subject sub:objtaxon .

sub:st60 a nt:OptionalStatement;
  rdf:object sub:comment;
  rdf:predicate rdfs:comment;
  rdf:subject sub:association .

sub:subjtaxon a nt:LocalResource;
  rdfs:label "the subject taxon concept" .

sub:subjtaxondef a nt:ExternalUriPlaceholder;
  rdfs:label "publication DOI (https://doi.org/...) or taxon treatment ID (https://treatment.plazi.org/id/...)";
  nt:hasRegex "(https://doi.org/|https://treatment.plazi.org/id/).+" .

sub:subjtaxonname a nt:GuidedChoicePlaceholder;
  rdfs:label "search and select from list (if not found, you may paste identifying URL from IPNI, MycoBank, or Index Fungorum)";
  nt:possibleValuesFromApi "https://vodex.petapico.org/nidx/query?rows=100&q=label:" .

rdf:type rdfs:label "is a" .

rdfs:comment rdfs:label "has the free-text comment" .

<https://w3id.org/biolink/vocab/OrganismTaxonToOrganismTaxonAssociation> rdfs:label
    "synonymy association between two organism taxa" .

<https://w3id.org/biolink/vocab/object> rdfs:label "refers to - links this association to its first taxon" .

<https://w3id.org/biolink/vocab/predicate> rdfs:label "refers to the synonymy relation" .

<https://w3id.org/biolink/vocab/subject> rdfs:label "refers to - links an association to its second taxon" .

<https://w3id.org/kpxl/biodiv/terms/hasTaxonConceptDefinition> rdfs:label "is used as defined in" .

<https://w3id.org/kpxl/biodiv/terms/hasTaxonName> rdfs:label "has the name - links a taxon concept to its name" .

sub:sig npx:hasAlgorithm "RSA";
  npx:hasPublicKey "MIGfMA0GCSqGSIb3DQEBAQUAA4GNADCBiQKBgQCjDGQCS1S+SRnERDuYDXOugdYUP0efEquHJEEHAbU/uLzBVlga89zqrNPCS7fBE6lArBUWEmT8eLKdMapyqvAzI1J3jUWTMhDJF+XFBkUiuiFfNSc4vJJcmi0yujtnuzXsRIG202jyaP4f5ULoskFwaZOSBZJfiE0dsB3D7DTIAQIDAQAB";
  npx:hasSignature "PANUq958DyATONVIjqo5nqH/ssTbeeHLn30OpV56Uo4HuhcTM4CT4e0EDOjAVK6xSuaEln97hFiod5FfGXmbvQyFLZ4q012Ro3xHPxOPrHXpgL7qRdMbxDvKsCwaolX/BbJu3MtP2SUiZlT7pFysiDfY2yMjZ6Fu0RqggXIJ618=";
  npx:hasSignatureTarget ns1:RAFZVCvFTwhuGWf7nzovfrWipaPUZbqeYw99XtL5q6KL8 .

