Template: Expressing an association between an organism taxon and a gene

Full identifier: https://w3id.org/np/RAXwuoW8KqU4BzMWzh_0Hqwn_CQtZWgNu1he4nlq0NRWM

 Template: Expressing an association between an organism taxon and a gene AssertionTemplate ▼ comment approve/disapprove edit as derived nanopublication create new with same template use template

This is the identifier for the assertion of this nanopublication. https://w3id.org/np/RAXwuoW8Kq...#assertion This assertion http://www.w3.org/1999/02/22-rdf-syntax-ns#type is a https://w3id.org/np/o/ntemplate/AssertionTemplate assertion template .

This is the identifier for the assertion of this nanopublication. https://w3id.org/np/RAXwuoW8Kq...#assertion This assertion http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal) "Expressing an association between an organism taxon and a gene" .

This is the identifier for the assertion of this nanopublication. https://w3id.org/np/RAXwuoW8Kq...#assertion This assertion http://purl.org/dc/terms/description has the description (this is a literal) "Such a nanopublication expresses an association between an organism taxon (e.g. a species) and a gene." .

This is the identifier for the assertion of this nanopublication. https://w3id.org/np/RAXwuoW8Kq...#assertion This assertion https://w3id.org/np/o/ntemplate/hasTag has tag (this is a literal) "Biodiversity" .

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAXwuoW8Kq...#st0 st0 http://www.w3.org/1999/02/22-rdf-syntax-ns#subject has as subject This is a local identifier minted within the nanopublication. https://w3id.org/np/RAXwuoW8Kq...#association association .

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAXwuoW8Kq...#st0 st0 http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate has as predicate http://www.w3.org/1999/02/22-rdf-syntax-ns#type is a .

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAXwuoW8Kq...#st0 st0 http://www.w3.org/1999/02/22-rdf-syntax-ns#object has as object https://w3id.org/kpxl/biodiv/terms/OrganismTaxonToGeneAssociation OrganismTaxonToGeneAssociation .

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This is a local identifier minted within the nanopublication. https://w3id.org/np/RAXwuoW8Kq...#st1 st1 http://www.w3.org/1999/02/22-rdf-syntax-ns#subject has as subject This is a local identifier minted within the nanopublication. https://w3id.org/np/RAXwuoW8Kq...#association association .

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAXwuoW8Kq...#st1 st1 http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate has as predicate https://w3id.org/biolink/vocab/subject subject .

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAXwuoW8Kq...#st1 st1 http://www.w3.org/1999/02/22-rdf-syntax-ns#object has as object This is a local identifier minted within the nanopublication. https://w3id.org/np/RAXwuoW8Kq...#taxon taxon .

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This is a local identifier minted within the nanopublication. https://w3id.org/np/RAXwuoW8Kq...#st2 st2 http://www.w3.org/1999/02/22-rdf-syntax-ns#subject has as subject This is a local identifier minted within the nanopublication. https://w3id.org/np/RAXwuoW8Kq...#association association .

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAXwuoW8Kq...#st2 st2 http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate has as predicate https://w3id.org/kpxl/biodiv/terms/hasSubjectLifeCycleStage hasSubjectLifeCycleStage .

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAXwuoW8Kq...#st2 st2 http://www.w3.org/1999/02/22-rdf-syntax-ns#object has as object This is a local identifier minted within the nanopublication. https://w3id.org/np/RAXwuoW8Kq...#lifecyclestage lifecyclestage .

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This is a local identifier minted within the nanopublication. https://w3id.org/np/RAXwuoW8Kq...#st3 st3 http://www.w3.org/1999/02/22-rdf-syntax-ns#subject has as subject This is a local identifier minted within the nanopublication. https://w3id.org/np/RAXwuoW8Kq...#association association .

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAXwuoW8Kq...#st3 st3 http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate has as predicate https://w3id.org/biolink/vocab/predicate predicate .

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAXwuoW8Kq...#st3 st3 http://www.w3.org/1999/02/22-rdf-syntax-ns#object has as object This is a local identifier minted within the nanopublication. https://w3id.org/np/RAXwuoW8Kq...#relation relation .

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This is a local identifier minted within the nanopublication. https://w3id.org/np/RAXwuoW8Kq...#st4 st4 http://www.w3.org/1999/02/22-rdf-syntax-ns#subject has as subject This is a local identifier minted within the nanopublication. https://w3id.org/np/RAXwuoW8Kq...#association association .

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAXwuoW8Kq...#st4 st4 http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate has as predicate https://w3id.org/biolink/vocab/object object .

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAXwuoW8Kq...#st4 st4 http://www.w3.org/1999/02/22-rdf-syntax-ns#object has as object This is a local identifier minted within the nanopublication. https://w3id.org/np/RAXwuoW8Kq...#gene gene .

This is the identifier for the assertion of this nanopublication. https://w3id.org/np/RAXwuoW8Kq...#assertion This assertion https://w3id.org/np/o/ntemplate/hasStatement includes This is a local identifier minted within the nanopublication. https://w3id.org/np/RAXwuoW8Kq...#st0 st0 .

This is the identifier for the assertion of this nanopublication. https://w3id.org/np/RAXwuoW8Kq...#assertion This assertion https://w3id.org/np/o/ntemplate/hasStatement includes This is a local identifier minted within the nanopublication. https://w3id.org/np/RAXwuoW8Kq...#st1 st1 .

This is the identifier for the assertion of this nanopublication. https://w3id.org/np/RAXwuoW8Kq...#assertion This assertion https://w3id.org/np/o/ntemplate/hasStatement includes This is a local identifier minted within the nanopublication. https://w3id.org/np/RAXwuoW8Kq...#st2 st2 .

This is the identifier for the assertion of this nanopublication. https://w3id.org/np/RAXwuoW8Kq...#assertion This assertion https://w3id.org/np/o/ntemplate/hasStatement includes This is a local identifier minted within the nanopublication. https://w3id.org/np/RAXwuoW8Kq...#st3 st3 .

This is the identifier for the assertion of this nanopublication. https://w3id.org/np/RAXwuoW8Kq...#assertion This assertion https://w3id.org/np/o/ntemplate/hasStatement includes This is a local identifier minted within the nanopublication. https://w3id.org/np/RAXwuoW8Kq...#st4 st4 .

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAXwuoW8Kq...#st2 st2 http://www.w3.org/1999/02/22-rdf-syntax-ns#type is a https://w3id.org/np/o/ntemplate/OptionalStatement optional statement .

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAXwuoW8Kq...#association association http://www.w3.org/1999/02/22-rdf-syntax-ns#type is a https://w3id.org/np/o/ntemplate/IntroducedResource Introduced resource .

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAXwuoW8Kq...#association association http://www.w3.org/1999/02/22-rdf-syntax-ns#type is a https://w3id.org/np/o/ntemplate/LocalResource Local resource .

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAXwuoW8Kq...#gene gene http://www.w3.org/1999/02/22-rdf-syntax-ns#type is a https://w3id.org/np/o/ntemplate/GuidedChoicePlaceholder Guided choice placeholder .

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAXwuoW8Kq...#lifecyclestage lifecyclestage http://www.w3.org/1999/02/22-rdf-syntax-ns#type is a https://w3id.org/np/o/ntemplate/GuidedChoicePlaceholder Guided choice placeholder .

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAXwuoW8Kq...#relation relation http://www.w3.org/1999/02/22-rdf-syntax-ns#type is a https://w3id.org/np/o/ntemplate/GuidedChoicePlaceholder Guided choice placeholder .

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAXwuoW8Kq...#taxon taxon http://www.w3.org/1999/02/22-rdf-syntax-ns#type is a https://w3id.org/np/o/ntemplate/GuidedChoicePlaceholder Guided choice placeholder .

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAXwuoW8Kq...#relation relation https://w3id.org/np/o/ntemplate/possibleValue has as possible value http://purl.obolibrary.org/obo/RO_0001019 RO_0001019 .

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAXwuoW8Kq...#gene gene https://w3id.org/np/o/ntemplate/possibleValuesFromApi has possible values from API (this is a literal) "https://www.ebi.ac.uk/ols/api/select?ontology=ogg&fieldList=iri,label,description&q=" .

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAXwuoW8Kq...#lifecyclestage lifecyclestage https://w3id.org/np/o/ntemplate/possibleValuesFromApi has possible values from API (this is a literal) "https://www.ebi.ac.uk/ols/api/select?ontology=uberon&fieldList=iri,label,description&childrenOf=http://purl.obolibrary.org/obo/UBERON_0000105&q=" .

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAXwuoW8Kq...#relation relation https://w3id.org/np/o/ntemplate/possibleValuesFromApi has possible values from API (this is a literal) "https://www.ebi.ac.uk/ols/api/select?ontology=ro&fieldList=iri,label,description&q=" .

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAXwuoW8Kq...#taxon taxon https://w3id.org/np/o/ntemplate/possibleValuesFromApi has possible values from API (this is a literal) "https://vodex.petapico.org/nidx/query?rows=100&q=label:" .

http://purl.obolibrary.org/obo/RO_0001019 RO_0001019 http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal) "contains" .

http://www.w3.org/1999/02/22-rdf-syntax-ns#type is a http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal) "is a" .

https://w3id.org/biolink/vocab/object object http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal) "refers to the gene" .

https://w3id.org/biolink/vocab/predicate predicate http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal) "refers to the relation (between taxon and gene)" .

https://w3id.org/biolink/vocab/subject subject http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal) "refers to the organism taxon" .

https://w3id.org/kpxl/biodiv/terms/OrganismTaxonToGeneAssociation OrganismTaxonToGeneAssociation http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal) "association of an organism taxon to a gene" .

https://w3id.org/kpxl/biodiv/terms/hasSubjectLifeCycleStage hasSubjectLifeCycleStage http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal) "refers to the taxon's life cycle stage" .

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAXwuoW8Kq...#association association http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal) "this association" .

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAXwuoW8Kq...#gene gene http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal) "the gene to be associated with the taxon" .

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAXwuoW8Kq...#lifecyclestage lifecyclestage http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal) "the life cycle stage" .

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAXwuoW8Kq...#relation relation http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal) "the type of relation between the taxon and the gene" .

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAXwuoW8Kq...#taxon taxon http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal) "the organism taxon, e.g. a species" .

This is the identifier for the assertion of this nanopublication. https://w3id.org/np/RAXwuoW8Kq...#assertion The assertion above http://www.w3.org/ns/prov#wasAttributedTo is attributed to https://orcid.org/0000-0002-1267-0234 me (Tobias Kuhn) .

This is the identifier for this whole nanopublication. https://w3id.org/np/RAXwuoW8Kq... This nanopublication http://purl.org/dc/terms/creator is created by https://orcid.org/0000-0002-1267-0234 me (Tobias Kuhn) .

This is the identifier for this whole nanopublication. https://w3id.org/np/RAXwuoW8Kq... This nanopublication http://purl.org/dc/terms/license is published under the license https://creativecommons.org/licenses/by/4.0/ Attribution 4.0 International (CC BY 4.0) .

This is the identifier for this whole nanopublication. https://w3id.org/np/RAXwuoW8Kq... This nanopublication http://purl.org/nanopub/x/supersedes supersedes http://purl.org/np/RAQcn-NHXc... RAQcn-NHXc .

This is the identifier for this whole nanopublication. https://w3id.org/np/RAXwuoW8Kq... This nanopublication http://www.w3.org/2000/01/rdf-schema#label has the label (this is a literal) "Template: Expressing an association between an organism taxon and a gene" .

This is the identifier for this whole nanopublication. https://w3id.org/np/RAXwuoW8Kq... This nanopublication date and time when the nanopublication was created http://purl.org/dc/terms/created was created on (this is a literal) "2024-02-06T19:51:25.878Z" .

This is the identifier for this whole nanopublication. https://w3id.org/np/RAXwuoW8Kq... This nanopublication links to the assertion template that was used to create this nanopublication https://w3id.org/np/o/ntemplate/wasCreatedFromTemplate was created from the assertion template http://purl.org/np/RAJwu5sVub... RAJwu5sVub .

This is the identifier for this whole nanopublication. https://w3id.org/np/RAXwuoW8Kq... This nanopublication links to the provenance template that was used to create this nanopublication https://w3id.org/np/o/ntemplate/wasCreatedFromProvenanceTemplate was created from the provenance template http://purl.org/np/RANwQa4ICW... RANwQa4ICW .

This is the identifier for this whole nanopublication. https://w3id.org/np/RAXwuoW8Kq... This nanopublication links to the publication info template that was used to create this nanopublication https://w3id.org/np/o/ntemplate/wasCreatedFromPubinfoTemplate was created from the publication info template http://purl.org/np/RAA2MfqdBC... RAA2MfqdBC .

This is the identifier for this whole nanopublication. https://w3id.org/np/RAXwuoW8Kq... This nanopublication links to the publication info template that was used to create this nanopublication https://w3id.org/np/o/ntemplate/wasCreatedFromPubinfoTemplate was created from the publication info template http://purl.org/np/RAh1gm83Ji... RAh1gm83Ji .

This is the identifier for this whole nanopublication. https://w3id.org/np/RAXwuoW8Kq... This nanopublication links to the publication info template that was used to create this nanopublication https://w3id.org/np/o/ntemplate/wasCreatedFromPubinfoTemplate was created from the publication info template http://purl.org/np/RAjpBMlw3o... RAjpBMlw3o .

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAXwuoW8Kq...#sig sig http://purl.org/nanopub/x/hasSignatureTarget has as target This is the identifier for this whole nanopublication. https://w3id.org/np/RAXwuoW8Kq... this nanopublication .

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAXwuoW8Kq...#sig sig http://purl.org/nanopub/x/hasAlgorithm has the algorithm (this is a literal) "RSA" .

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAXwuoW8Kq...#sig sig http://purl.org/nanopub/x/hasPublicKey has the public key (this is a literal) "MIGfMA0GCSqGSIb3DQEBAQUAA4GNADCBiQKBgQCjDGQCS1S+SRnERDuYDXOugdYUP0efEquHJEEHAbU/uLzBVlga89zqrNPCS7fBE6lArBUWEmT8eLKdMapyqvAzI1J3jUWTMhDJF+XFBkUiuiFfNSc4vJJcmi0yujtnuzXsRIG202jyaP4f5ULoskFwaZOSBZJfiE0dsB3D7DTIAQIDAQAB" .

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAXwuoW8Kq...#sig sig http://purl.org/nanopub/x/hasSignature has the signature (this is a literal) "jk6Ft1kA3od9BK34pjKyx8I6MzQdUpGWbi5AW+srO5xM5wnczNxEOhry1Nmo5E9nYeXgr6tnPMVs0b7Q3omH6SDeLUjdaRl0qVV8HW1Yj1xngx2rgs0mhX+y+u/r12HyW67s63/2widlefw+aXjFzz8Wck0n4vuAwz7kRG7gjgY=" .

Tobias Kuhn, 6 Feb 2024, 19:51:25 UTC

References