📅 Date
ℹ About
Agenda:
- Yuanxi Fu: “Nanopublication for Documenting Scholarly Growth” - Many contemporary scholarly big-data infrastructures focus on the public-facing dimensions of scholarship, such as publications, funding records, citations, and institutional affiliations. In contrast, this talk explores how nanopublications might provide an infrastructure for documenting a scholar’s intellectual growth over time.
- Christian Meesters: “Software Provenance with Snakemake” - Why workflow managers are essential on HPC and how Snakemake automates reproducibility. Live demo: running a workflow, generating an HTML report with publication-ready figures, and exporting software metadata as a nanopublication, plus a mini visual knowledge graph via a single plugin.
- Jitsi meeting link: https://meet.jit.si/nanosession
Roles:
(none)
Admins
(none)
Participants
Speakers
(none)
Observers
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Planned attendants
📌 Relevant resources
- https://nanodash.knowledgepixe...SnakemakeWorkflowRegistrations Query: Snakemake Workflow Registrations · The query presented by Christian Meesters in his talk · https://w3id.org/np/RAye7vWhwd... ^
💬 Messages
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Also great talk by Christian Meesters on how to use nanopublications for computational workflow descriptions, and on plans to spread the word and get more people involved via tutorials.
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2026-06-09T14:55:28.614Z
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We could make the tutorial slide creation, as mentioned by Christian, a community effort.
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2026-06-09T14:54:18.502Z
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Note to self: I should make a "question view" so we can allow participants to write questions for speakers while they speak, so they can be answered during the discussion or after the event.
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2026-06-09T14:52:20.595Z
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@Christian - when embedding things like the abstracts of papers into nanopublications, how to keep track of the copyright of the components of the nanopub?
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2026-06-09T14:49:23.482Z
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@Christian - I have a dataset with information about the reproducibility of Jupyter notebooks. In what ways can Snakemake assist in publishing this as nanopublications?
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2026-06-09T14:47:12.306Z
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@Christian - can I include containers into a Snakemaker workflow, or can Snakemake workflows be usefully containerized?
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2026-06-09T14:44:39.139Z
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I have been using personal principles that guide my knowledge-related professional and volunteering activities. I would like to convert these into some nanopublication-based structure, ideally in a way that would make it simpler to find people or other entities with aligned values.
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2026-06-09T14:42:49.358Z
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This was a very interesting talk by Yuanxi Fu on letting scholars publish different kinds of things about their research, more reflecting true influence and give a more complete picture of a scholar's activities and outcomes.
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2026-06-09T14:35:11.721Z
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Just mentioned by Yuanxi: The Discipline of Nature and the Nature of Disciplines
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2026-06-09T14:21:06.216Z
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Are the slides for the talks available somewhere public?
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2026-06-09T09:35:12.578Z
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